Package: DropletUtils
Version: 1.1.10
Date: 2018-09-08
Title: Utilities for Handling Single-Cell Droplet Data
Authors@R: c(person("Aaron", "Lun", role = c("aut", "cre"), 
    email = "alun@wehi.edu.au"), person("Jonathan",
    "Griffiths", role="ctb"), person("Davis", "McCarthy",
    role="ctb"))
Maintainer: Aaron Lun <alun@wehi.edu.au>
Depends: R (>= 3.5), BiocParallel, SingleCellExperiment
Imports: S4Vectors, Matrix, methods, utils, stats, edgeR, Rcpp, rhdf5,
    HDF5Array
Suggests: testthat, beachmat, knitr, BiocStyle, rmarkdown
biocViews: SingleCell, Sequencing, RNASeq, GeneExpression, 
    Transcriptomics, DataImport, Coverage
Description: Provides a number of utility functions for handling 
    single-cell (RNA-seq) data from droplet technologies such as 10X
    Genomics. This includes data loading, identification of cells from 
    empty droplets, removal of barcode-swapped pseudo-cells, and 
    downsampling of the count matrix.
License: GPL-3
NeedsCompilation: yes
VignetteBuilder: knitr
LinkingTo: Rcpp, beachmat, Rhdf5lib
SystemRequirements: C++11
RoxygenNote: 6.1.0