# ESTIMATE: Estimate of STromal and Immune cells in MAlignant Tumor tissues using Expression data

## Documentation for package ‘estimate’ version 1.0.11

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

estimate-package | ESTIMATE
common_genes | 10,412 common genes
estimate | ESTIMATE
estimateScore | Calculation of stromal, immune, and ESTIMATE scores
filterCommonGenes | Intersect input data with 10,412 common genes
outputGCT | Write gene expression data in GCT format
plotPurity | Plot tumor purity
PurityDataAffy | Affymetrix data
SI_geneset | two signatures for estimate